gene-mapper-experimental-base gene-mapper-experimental-base

Parent julielab-gene-mapper
Group de.julielab
描述 This project has a lot of business classes to work with genes and related named entities. Genes are part of a GeneDocument and may have gold IDs as well as mapped/predicted IDs. Another large part are species because most (all?) gene ID databases are species specific. So there are also classes or members to represent species mentions and the assignment of species IDs (taxonomy IDs) to genes. There is little to no business logic herein. This project is only useful as building block in other projects dealing with species assignment, gene ID mapping or similar efforts.
Packaging jar
Size 473.24 KB
文件 pom jar
发布时间 2022-12-04 02:41

dependencies

Group Artifact Version
org.apache.commons commons-lang3
org.apache.commons commons-text 1.9
de.julielab julielab-java-utilities 1.4.4
org.slf4j slf4j-api
org.apache.lucene lucene-analyzers-common 8.5.0
com.google.guava guava 30.1.1-jre
de.julielab julielab-ranklib-mallet 1.0.0
de.julielab jcore-mallet-2.0.9 2.1.0
tw.edu.ntu.csie libsvm 3.24
com.sparkjava spark-core [2.7.2,)
com.google.inject guice 5.0.1
com.google.inject.extensions guice-testlib 5.0.1
de.julielab julie-xml-tools 0.6.2
de.julielab julielab-entity-evaluator 1.3.0
org.ehcache ehcache 3.8.1
javax.cache cache-api 1.1.1
org.jetbrains annotations RELEASE
commons-codec commons-codec 1.13
commons-io commons-io [2.7,20030203.000550)
org.junit.jupiter junit-jupiter-engine
org.assertj assertj-core
com.wcohen com.wcohen.secondstring 0.1

developers

faessler Erik Faessler

licenses

BSD-2-Clause https://opensource.org/licenses/BSD-2-Clause
索引仓库
仓库 个数
Central 592045
393522