gene-mapper-experimental-base gene-mapper-experimental-base

Parent	julielab-gene-mapper
Group	de.julielab
描述	This project has a lot of business classes to work with genes and related named entities. Genes are part of a GeneDocument and may have gold IDs as well as mapped/predicted IDs. Another large part are species because most (all?) gene ID databases are species specific. So there are also classes or members to represent species mentions and the assignment of species IDs (taxonomy IDs) to genes. There is little to no business logic herein. This project is only useful as building block in other projects dealing with species assignment, gene ID mapping or similar efforts.
Packaging	jar
Size	473.24 KB
文件	pom jar
发布时间	2022-12-04 02:41

dependencies

Group	Artifact	Version
org.apache.commons	commons-lang3
org.apache.commons	commons-text	1.9
de.julielab	julielab-java-utilities	1.4.4
org.slf4j	slf4j-api
org.apache.lucene	lucene-analyzers-common	8.5.0
com.google.guava	guava	30.1.1-jre
de.julielab	julielab-ranklib-mallet	1.0.0
de.julielab	jcore-mallet-2.0.9	2.1.0
tw.edu.ntu.csie	libsvm	3.24
com.sparkjava	spark-core	[2.7.2,)
com.google.inject	guice	5.0.1
com.google.inject.extensions	guice-testlib	5.0.1
de.julielab	julie-xml-tools	0.6.2
de.julielab	julielab-entity-evaluator	1.3.0
org.ehcache	ehcache	3.8.1
javax.cache	cache-api	1.1.1
org.jetbrains	annotations	RELEASE
commons-codec	commons-codec	1.13
commons-io	commons-io	[2.7,20030203.000550)
org.junit.jupiter	junit-jupiter-engine
org.assertj	assertj-core
com.wcohen	com.wcohen.secondstring	0.1

developers

faessler

Erik Faessler

licenses

BSD-2-Clause

https://opensource.org/licenses/BSD-2-Clause