GATK4 gatk

Group	org.broadinstitute
描述	Development on GATK 4
Packaging
Size
文件	pom jar
网址	http://github.com/broadinstitute/gatk
发布时间	2016-08-18 06:17

dependencies

Group	Artifact	Version
com.intel	genomicsdb	0.2.1
com.opencsv	opencsv	3.4
com.google.guava	guava	18.0
com.github.samtools	htsjdk	2.6.0
com.google.cloud	gcloud-java-nio	0.2.5
com.google.cloud.genomics	google-genomics-dataflow	v1beta2-0.15
com.google.cloud.genomics	gatk-tools-java	1.1
org.apache.logging.log4j	log4j-api	2.3
org.apache.logging.log4j	log4j-core	2.3
org.apache.commons	commons-lang3	3.4
org.apache.commons	commons-math3	3.5
org.apache.commons	commons-collections4	4.1
org.apache.commons	commons-vfs2	2.0
commons-io	commons-io	2.4
org.reflections	reflections	0.9.10
net.sf.jopt-simple	jopt-simple	5.0-beta-1
com.google.cloud.dataflow	google-cloud-dataflow-java-sdk-all	0.4.150727
it.unimi.dsi	fastutil	7.0.6
com.google.apis	google-api-services-genomics	v1-rev90-1.22.0
com.google.cloud.genomics	google-genomics-utils	v1beta2-0.30
org.ojalgo	ojalgo	39.0
org.apache.spark	spark-mllib_2.10	1.6.1
org.bdgenomics.bdg-formats	bdg-formats	0.5.0
org.bdgenomics.adam	adam-core_2.10	0.18.0
org.jgrapht	jgrapht-core	0.9.1
org.testng	testng	6.9.6
org.apache.hadoop	hadoop-minicluster	2.7.2
org.seqdoop	hadoop-bam	7.6.0
org.apache.hadoop	hadoop-client	2.7.2
com.github.jsr203hadoop	jsr203hadoop	1.0.2
de.javakaffee	kryo-serializers	0.37
com.github.fommil.netlib	all	1.1.2
com.esotericsoftware	kryo	3.0.3
com.esotericsoftware	reflectasm	1.10.0
com.intel.gkl	gkl	0.1.2
com.github.lindenb	jbwa	1.0.0_ppc64
org.objenesis	objenesis	2.1
org.hamcrest	hamcrest-all	1.3
junit	junit	4.12
org.mockito	mockito-core	1.10.19

developers

gatkdev

GATK Development Team

licenses

BSD 3-Clause

https://github.com/broadinstitute/gatk/blob/master/LICENSE.TXT