GATK4 gatk

Group	org.broadinstitute
描述	Development on GATK4
Packaging
Size
文件	pom jar
网址	http://github.com/broadinstitute/hellbender
发布时间	2016-04-30 01:03

dependencies

Group	Artifact	Version
com.google.cloud.genomics	google-genomics-dataflow	v1beta2-0.15
junit	junit	4.12
org.seqdoop	hadoop-bam	7.4.0
org.mockito	mockito-core	1.10.19
de.javakaffee	kryo-serializers	0.26
org.apache.commons	commons-math3	3.5
org.jgrapht	jgrapht-core	0.9.1
org.bdgenomics.adam	adam-core_2.10	0.18.0
org.apache.spark	spark-core_2.10	1.5.0
com.google.cloud.dataflow	google-cloud-dataflow-java-sdk-all	0.4.150727
org.reflections	reflections	0.9.10
com.google.apis	google-api-services-genomics	v1beta2-rev56-1.20.0
com.github.samtools	htsjdk	2.2.2
com.github.jsr203hadoop	jsr203hadoop	1.0.1
com.google.cloud.genomics	gatk-tools-java	1.1
org.apache.logging.log4j	log4j-api	2.3
org.apache.commons	commons-vfs2	2.0
it.unimi.dsi	fastutil	7.0.6
org.bdgenomics.bdg-formats	bdg-formats	0.5.0
org.testng	testng	6.9.6
org.apache.hadoop	hadoop-minicluster	2.7.1
commons-io	commons-io	2.4
org.apache.hadoop	hadoop-client	2.7.1
com.google.cloud.genomics	google-genomics-utils	v1beta2-0.30
com.google.guava	guava	18.0
org.apache.logging.log4j	log4j-core	2.3
org.hamcrest	hamcrest-all	1.3
org.apache.commons	commons-collections4	4.1
net.sf.jopt-simple	jopt-simple	5.0-beta-1
org.apache.commons	commons-lang3	3.4

developers

gatkdev

GATK Development Team

licenses

BSD 3-Clause

https://github.com/broadinstitute/hellbender/blob/master/LICENSE.TXT